DIA-NN

DIA-NN - a universal software suite for data-independent acquisition (DIA) proteomics data processing. Conceived at the University of Cambridge, UK, in the laboratory of Kathryn Lilley (Cambridge Centre for Proteomics), DIA-NN opened a new chapter in proteomics, introducing a number of algorithms which enabled reliable, robust and quantitatively accurate large-scale experiments using high-throughput methods. DIA-NN is currently being further developed in the laboratory of Vadim Demichev at the Charité (University Medicine Berlin, Germany).

Installed version: DIA-NN v1.8.1

Usage

Example script : testDIANN.sh

#!/bin/bash

#SBATCH -e diann_test %j.err
#SBATCH -o diann_test%j.msg
#SBATCH -p thin
#SBATCH -N 1
#SBATCH --ntasks-per-node=1

module load diann/1.8.1

$DIANN_HOME/diann-1.8.1 -h

Submit with :

sbatch --account=your_project_ID testDIANN.sh

More info :

• https://github.com/vdemichev/DiaNN